Personal profile
Research interests
Pathogenic bacteria must assemble and secrete virulence factors to interact with host cells and cause disease. Our laboratory is interested in understanding mechanisms of virulence protein secretion by bacteria and the functions of secreted virulence factors within the host. Our long-term goal is to combine the identification of virulence factors with a detailed understanding of virulence factor biogenesis to elucidate mechanisms of pathogenesis and develop targets for the design of novel antimicrobial agents.
One focus of our research is the assembly of pili (also known as fimbriae) by uropathogenic Escherichia coli, the predominant causative agent of urinary tract infections. Pili are hairlike, adhesive organelles that radiate out from the bacterial surface and are critical for initiating and sustaining infection. The pili expressed by uropathogenic E. coli are polymers composed of thousands of subunit proteins, each of which must be assembled in a defined order on the bacterial surface. This is accomplished by a conserved secretion system termed the chaperone-usher pathway. We are using a combination of molecular, biochemical, and structural approaches to uncover the molecular details of pilus biogenesis by the chaperone-usher pathway, with an emphasis on events occurring at the bacterial outer membrane. We are exploiting this knowledge for the identification and development of small molecule ‘pilicides’ as alternatives to traditional antibiotics.
A second focus of our research is on virulence mechanisms of Francisella tularensis. F. tularensis is a Gram-negative, intracellular pathogen that causes the zoonotic disease tularemia. F. tularensis is highly virulent for humans, particularly when inhaled, and has the potential to be misused as a biological weapon. The molecular basis for the high infectivity and intracellular pathogenesis of F. tularensis is not well understood. We have identified several secretion systems important for Francisella virulence, including the pil genes, which function in both pilus assembly and protein secretion, and TolC, involved in multidrug efflux and virulence factor export. In addition, we have shown that F. tularensis produces outer membrane vesicles and novel, tubular extensions of its cell surface. These vesicles and tubes contain known F. tularensis virulence factors and are produced during infection of host cells. We are using a multidisciplinary approach, including cell culture and mouse infection models, to dissect the mechanism of action of these Francisella secretion systems and how they function to promote intracellular pathogenesis and subvert host immune responses during infection.
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Collaborations and top research areas from the last five years
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Funds from Stony Brook Foundation to fund Mini Grants. REACH
Rubin, C. (PI), Brouzes, E. (CoI), Carter, C. (CoI), Chan, M. L. (CoI), Coutsias, E. (CoI), Del Poeta, M. (CoI), Frohman, M. (CoI), Haley, J. (CoI), Hearing, P. (CoI), Ju, J. (CoI), Kaufman, A. (CoI), Kozakov, D. (CoI), Lin, W. (CoI), Ojima, I. (CoI), Panesar, R. (CoI), Pisconti, A. (CoI), Powers, R. (CoI), Qin, Y.-X. (CoI), Sampson, N. (CoI), Seeliger, J. (CoI), Serebryany, E. (CoI), Spaniolas, K. (CoI), Strey, H. (CoI), Sunar, U. (CoI), Thanassi, D. (CoI), Tonge, P. (CoI), Zhang, Y. (CoI), Zhao, W. (CoI), Fabel, D. (CoPI), Alaei, S. (CoI), Bates, A. (CoI), Boros, E. (CoI), Daryaee, F. (CoI), Docimo, S. (CoI), Girnun, G. (CoI), Goldan, A. (CoI), Levy, S. (CoI), Philip, F. (CoI), Pryor, A. D. (CoI), Yang, X. (CoI), Bluestein, D. (CoI), Rafailovich, M. (CoI), Singh, G. (CoI) & Fu, S. (CoI)
12/20/15 → 06/30/27
Project: Research
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Mechanism of the Usher in Assembly and Secretion of Pili
Thanassi, D. (PI), Kozakov, D. (CoPI) & Simmerling, C. (CoPI)
National Institute of General Medical Sciences
07/20/23 → 05/31/26
Project: Research
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Stony Brook University Laboratory for Comparative Medicine to Support Pandemic Preparedness
Thanassi, D. (PI)
National Institute of Allergy & Infectious Disease
09/16/22 → 02/28/25
Project: Research
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Molecular and Cell Biology of Infectious Diseases
Konopka, J. (PI) & Thanassi, D. (CoPI)
National Institute of Allergy & Infectious Disease
09/1/22 → 08/31/23
Project: Research
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Molecular and Cell Biology of Infectious Diseases
Konopka, J. (PI) & Thanassi, D. (CoPI)
National Institute of Allergy & Infectious Disease
09/1/21 → 08/31/22
Project: Research
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Outer membrane tube formation by Francisella novicida involves extensive envelope modifications and is linked with type VI secretion and alterations to the host phagosomal membrane
Rashid, M., Tachiyama, S., Zhu, S., Zhao, H., McCaig, W. D., Sun, J., Li, H., Liu, J. & Thanassi, D. G., Jun 2025, In: mBio. 16, 6, e01060-25.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Hybrid zinc oxide nanocoating on titanium implants: Controlled drug release for enhanced antibacterial and osteogenic performance in infectious conditions
Zhou, J., Wang, H., Virtanen, S., Witek, L., Dong, H., Thanassi, D., Shen, J., Yang, Y. P., Yu, C. & Zhu, D., Nov 2024, In: Acta Biomaterialia. 189, p. 589-604 16 p.Research output: Contribution to journal › Article › peer-review
19 Scopus citations -
Optimization of artificial membrane feeding system for lone star ticks, Amblyomma americanum (Acari: Ixodidae), and experimental infection with Rickettsia amblyommatis (Rickettsiales: Rickettsiaceae)
Rochlin, I., Chu, D., Gmelin, M., Le, J., Furie, M. B., Thanassi, D. G. & Kim, H. K., Mar 1 2024, In: Journal of Medical Entomology. 61, 2, p. 442-453 12 p.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
TolC and EmrA1 contribute to Francisella novicida multidrug resistance and modulation of host cell death
Kopping, E. J., Benziger, P. T. & Thanassi, D. G., Sep 2024, In: Journal of Bacteriology. 206, 9, e00246-24.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Francisella tularensis disrupts TLR2-MYD88-p38 signaling early during infection to delay apoptosis of macrophages and promote virulence in the host
Todd Benziger, P., Kopping, E. J., McLaughlin, P. A. & Thanassi, D. G., 2023, In: mBio. 14, 4Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations