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32-Channel single photon counting module for ultra-sensitive detection of DNA sequences

  • Georgiy Gudkov
  • , Vinit Dhulla
  • , Anatoly Borodin
  • , Dmitri Gavrilov
  • , Andrey Stepoukhovitch
  • , Andriy Tsupryk
  • , Boris Gorbovitski
  • , Vera Gorfinkel
  • Stony Brook University
  • BioPhotonics Corporation

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

7 Scopus citations

Abstract

We continue our work on the design and implementation of multi-channel single photon detection systems for highly sensitive detection of ultra-weak fluorescence signals, for high-performance, multi-lane DNA sequencing instruments. A fiberized, 32-channel single photon detection (SPD) module based on single photon avalanche diode (SPAD), model C30902S-DTC, from Perkin Elmer Optoelectronics (PKI) has been designed and implemented. Unavailability of high performance, large area SPAD arrays and our desire to design high performance photon counting systems drives us to use individual diodes. Slight modifications in our quenching circuit has doubled the linear range of our system from 1MHz to 2MHz, which is the upper limit for these devices and the maximum saturation count rate has increased to 14 MHz. The detector module comprises of a single board computer PC-104 that enables data visualization, recording, processing, and transfer. Very low dark count (300-1000 counts/s), robust, efficient, simple data collection and processing, ease of connectivity to any other application demanding similar requirements and similar performance results to the best commercially available single photon counting module (SPCM from PKI) are some of the features of this system.

Original languageEnglish
Title of host publicationAdvanced Photon Counting Techniques
DOIs
StatePublished - 2006
EventAdvanced Photon Counting Techniques - Boston, MA, United States
Duration: Oct 1 2006Oct 3 2006

Publication series

NameProceedings of SPIE - The International Society for Optical Engineering
Volume6372
ISSN (Print)0277-786X

Conference

ConferenceAdvanced Photon Counting Techniques
Country/TerritoryUnited States
CityBoston, MA
Period10/1/0610/3/06

Keywords

  • Avalanche photodiode (APD)
  • C30902S-DTC
  • DNA sequencing
  • Multi-channel photon counting
  • Multi-channel single-photon detection
  • Multi-lane DNA sequencing
  • Photon counting
  • Single-photon avalanche diode (SPAD)
  • Single-photon counting
  • Single-photon detection

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