TY - GEN
T1 - A multi-resolution image analysis system for computer-assisted grading of neuroblastoma differentiation
AU - Kong, Jun
AU - Sertel, Olcay
AU - Shimada, Hiroyuki
AU - Boyer, Kim L.
AU - Saltz, Joel H.
AU - Gurcan, Metin N.
PY - 2008
Y1 - 2008
N2 - Neuroblastic Tumor (NT) is one of the most commonly occurring tumors in children. Of all types of NTs, neuroblastoma is the most malignant tumor that can be further categorized into undifferentiated (UD), poorly-differentiated (PD) and differentiating (D) types, in terms of the grade of pathological differentiation. Currently, pathologists determine the grade of differentiation by visual examinations of tissue samples under the microscope. However, this process is subjective and, hence, may lead to intra- and inter-reader variability. In this paper, we propose a multi-resolution image analysis system that helps pathologists classify tissue samples according to their grades of differentiation. The inputs to this system are color images of haematoxylin and eosin (H&E) stained tissue samples. The complete image analysis system has five stages: segmentation, feature construction, feature extraction, classification and confidence evaluation. Due to the large number of input images, both parallel processing and multi-resolution analysis were carried out to reduce the execution time of the algorithm. Our training dataset consists of 387 images tiles of size 512&512 in pixels from three whole-slide images. We tested the developed system with an independent set of 24 whole-slide images, eight from each grade. The developed system has an accuracy of 83.3% in correctly identifying the grade of differentiation, and it takes about two hours, on average, to process each whole slide image.
AB - Neuroblastic Tumor (NT) is one of the most commonly occurring tumors in children. Of all types of NTs, neuroblastoma is the most malignant tumor that can be further categorized into undifferentiated (UD), poorly-differentiated (PD) and differentiating (D) types, in terms of the grade of pathological differentiation. Currently, pathologists determine the grade of differentiation by visual examinations of tissue samples under the microscope. However, this process is subjective and, hence, may lead to intra- and inter-reader variability. In this paper, we propose a multi-resolution image analysis system that helps pathologists classify tissue samples according to their grades of differentiation. The inputs to this system are color images of haematoxylin and eosin (H&E) stained tissue samples. The complete image analysis system has five stages: segmentation, feature construction, feature extraction, classification and confidence evaluation. Due to the large number of input images, both parallel processing and multi-resolution analysis were carried out to reduce the execution time of the algorithm. Our training dataset consists of 387 images tiles of size 512&512 in pixels from three whole-slide images. We tested the developed system with an independent set of 24 whole-slide images, eight from each grade. The developed system has an accuracy of 83.3% in correctly identifying the grade of differentiation, and it takes about two hours, on average, to process each whole slide image.
KW - Grade of differentiation
KW - Microscopy images
KW - Multiresolution
KW - Neuroblastoma prognosis
KW - Quantitative image analysis
UR - https://www.scopus.com/pages/publications/44449157736
U2 - 10.1117/12.768397
DO - 10.1117/12.768397
M3 - Conference contribution
AN - SCOPUS:44449157736
SN - 9780819470997
T3 - Progress in Biomedical Optics and Imaging - Proceedings of SPIE
BT - Medical Imaging 2008 - Computer-Aided Diagnosis
T2 - Medical Imaging 2008 - Computer-Aided Diagnosis
Y2 - 19 February 2008 through 21 February 2008
ER -