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A network approach to compute hypervolume under receiver operating characteristic manifold for multi-class biomarkers

  • Qunqiang Feng
  • , Pan Liu
  • , Pei Fen Kuan
  • , Fei Zou
  • , Jianan Chen
  • , Jialiang Li
  • University of Science and Technology of China
  • National University of Singapore
  • University of North Carolina at Chapel Hill
  • Duke University-NUS Graduate Medical School

Research output: Contribution to journalArticlepeer-review

4 Scopus citations

Abstract

Computation of hypervolume under ROC manifold (HUM) is necessary to evaluate biomarkers for their capability to discriminate among multiple disease types or diagnostic groups. However the original definition of HUM involves multiple integration and thus a medical investigation for multi-class receiver operating characteristic (ROC) analysis could suffer from huge computational cost when the formula is implemented naively. We introduce a novel graph-based approach to compute HUM efficiently in this article. The computational method avoids the time-consuming multiple summation when sample size or the number of categories is large. We conduct extensive simulation studies to demonstrate the improvement of our method over existing R packages. We apply our method to two real biomedical data sets to illustrate its application.

Original languageEnglish
Pages (from-to)834-859
Number of pages26
JournalStatistics in Medicine
Volume42
Issue number6
DOIs
StatePublished - Mar 15 2023

Keywords

  • diagnostic medicine
  • exposome
  • hypervolume under ROC manifold
  • mild cognitive impairment
  • network graph
  • post-traumatic stress disorder

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