TY - GEN
T1 - Cell image analysis
T2 - Algorithms, system and applications
AU - Kanade, Takeo
AU - Yin, Zhaozheng
AU - Bise, Ryoma
AU - Huh, Seungil
AU - Eom, Sungeun
AU - Sandbothe, Michael F.
AU - Chen, Mei
PY - 2011
Y1 - 2011
N2 - We present several algorithms for cell image analysis including microscopy image restoration, cell event detection and cell tracking in a large population. The algorithms are integrated into an automated system capable of quantifying cell proliferation metrics in vitro in real-time. This offers unique opportunities for biological applications such as efficient cell behavior discovery in response to different cell culturing conditions and adaptive experiment control. We quantitatively evaluated our system's performance on 16 microscopy image sequences with satisfactory accuracy for biologists' need. We have also developed a public website compatible to the system's local user interface, thereby allowing biologists to conveniently check their experiment progress online. The website will serve as a community resource that allows other research groups to upload their cell images for analysis and comparison.
AB - We present several algorithms for cell image analysis including microscopy image restoration, cell event detection and cell tracking in a large population. The algorithms are integrated into an automated system capable of quantifying cell proliferation metrics in vitro in real-time. This offers unique opportunities for biological applications such as efficient cell behavior discovery in response to different cell culturing conditions and adaptive experiment control. We quantitatively evaluated our system's performance on 16 microscopy image sequences with satisfactory accuracy for biologists' need. We have also developed a public website compatible to the system's local user interface, thereby allowing biologists to conveniently check their experiment progress online. The website will serve as a community resource that allows other research groups to upload their cell images for analysis and comparison.
UR - https://www.scopus.com/pages/publications/79952492728
U2 - 10.1109/WACV.2011.5711528
DO - 10.1109/WACV.2011.5711528
M3 - Conference contribution
AN - SCOPUS:79952492728
SN - 9781424494965
T3 - 2011 IEEE Workshop on Applications of Computer Vision, WACV 2011
SP - 374
EP - 381
BT - 2011 IEEE Workshop on Applications of Computer Vision, WACV 2011
PB - IEEE Computer Society
ER -