Draft genome sequences of three emerging beta-lactamase-producing Escherichia coli in the camel production system in Northern Kenya

Rachael Gachogo; Irene Karegi; Brian Ogoti; Victor Musyoki; Dino Martins; Frank Onyambu; Joseph Kamau

doi:10.12688/f1000research.127990.2

Draft genome sequences of three emerging beta-lactamase-producing Escherichia coli in the camel production system in Northern Kenya

Rachael Gachogo
, Irene Karegi
, Brian Ogoti
, Victor Musyoki
, Dino Martins
, Frank Onyambu
, Joseph Kamau

Center for Molecular Biosciences and Genomics
University of Cape Town
National Museums of Kenya
Jomo Kenyatta University of Agriculture and Technology
Washington State University
University of Nairobi
Meru University of Science & Technology

Research output: Contribution to journal › Article › peer-review

Abstract

We report the draft genome sequences and annotation of three beta-lactamase-producing Escherichia coli (E.coli) strains isolated from fecal samples of healthy camels in Laikipia county, Kenya. This data adds to the online genome resources to support the ongoing antimicrobial resistance surveillance in the livestock-wildlife interface.

Original language	English
Article number	1413
Journal	F1000Research
Volume	11
DOIs	https://doi.org/10.12688/f1000research.127990.2
State	Published - 2023

Keywords

AMR
E.coli
beta-lactamase
camel
genome
whole genome sequencing

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10.12688/f1000research.127990.2

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title = "Draft genome sequences of three emerging beta-lactamase-producing Escherichia coli in the camel production system in Northern Kenya",

abstract = "We report the draft genome sequences and annotation of three beta-lactamase-producing Escherichia coli (E.coli) strains isolated from fecal samples of healthy camels in Laikipia county, Kenya. This data adds to the online genome resources to support the ongoing antimicrobial resistance surveillance in the livestock-wildlife interface.",

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author = "Rachael Gachogo and Irene Karegi and Brian Ogoti and Victor Musyoki and Dino Martins and Frank Onyambu and Joseph Kamau",

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AU - Gachogo, Rachael

AU - Karegi, Irene

AU - Ogoti, Brian

AU - Musyoki, Victor

AU - Martins, Dino

AU - Onyambu, Frank

AU - Kamau, Joseph

PY - 2023

Y1 - 2023

N2 - We report the draft genome sequences and annotation of three beta-lactamase-producing Escherichia coli (E.coli) strains isolated from fecal samples of healthy camels in Laikipia county, Kenya. This data adds to the online genome resources to support the ongoing antimicrobial resistance surveillance in the livestock-wildlife interface.

AB - We report the draft genome sequences and annotation of three beta-lactamase-producing Escherichia coli (E.coli) strains isolated from fecal samples of healthy camels in Laikipia county, Kenya. This data adds to the online genome resources to support the ongoing antimicrobial resistance surveillance in the livestock-wildlife interface.

KW - AMR

KW - E.coli

KW - beta-lactamase

KW - camel

KW - genome

KW - whole genome sequencing

UR - https://www.scopus.com/pages/publications/85152900548

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DO - 10.12688/f1000research.127990.2

M3 - Article

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AN - SCOPUS:85152900548

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JO - F1000Research

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Draft genome sequences of three emerging beta-lactamase-producing Escherichia coli in the camel production system in Northern Kenya

Abstract

Keywords

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