GlycoPattern: A Web platform for glycan array mining

Sanjay B. Agravat; Joel H. Saltz; Richard D. Cummings; David F. Smith

doi:10.1093/bioinformatics/btu559

GlycoPattern: A Web platform for glycan array mining

Sanjay B. Agravat
, Joel H. Saltz
, Richard D. Cummings
, David F. Smith

Biomedical Informatics

Emory University

Research output: Contribution to journal › Article › peer-review

46 Scopus citations

Abstract

Summary: GlycoPattern is Web-based bioinformatics resource to support the analysis of glycan array data for the Consortium for Functional Glycomics. This resource includes algorithms and tools to discover structural motifs, a heatmap visualization to compare multiple experiments, hierarchical clustering of Glycan Binding Proteins with respect to their binding motifs and a structural search feature on the experimental data.

Original language	English
Pages (from-to)	3417-3418
Number of pages	2
Journal	Bioinformatics
Volume	30
Issue number	23
DOIs	https://doi.org/10.1093/bioinformatics/btu559
State	Published - Dec 1 2014

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title = "GlycoPattern: A Web platform for glycan array mining",

abstract = "Summary: GlycoPattern is Web-based bioinformatics resource to support the analysis of glycan array data for the Consortium for Functional Glycomics. This resource includes algorithms and tools to discover structural motifs, a heatmap visualization to compare multiple experiments, hierarchical clustering of Glycan Binding Proteins with respect to their binding motifs and a structural search feature on the experimental data.",

author = "Agravat, \{Sanjay B.\} and Saltz, \{Joel H.\} and Cummings, \{Richard D.\} and Smith, \{David F.\}",

year = "2014",

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AU - Agravat, Sanjay B.

AU - Saltz, Joel H.

AU - Cummings, Richard D.

AU - Smith, David F.

PY - 2014/12/1

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N2 - Summary: GlycoPattern is Web-based bioinformatics resource to support the analysis of glycan array data for the Consortium for Functional Glycomics. This resource includes algorithms and tools to discover structural motifs, a heatmap visualization to compare multiple experiments, hierarchical clustering of Glycan Binding Proteins with respect to their binding motifs and a structural search feature on the experimental data.

AB - Summary: GlycoPattern is Web-based bioinformatics resource to support the analysis of glycan array data for the Consortium for Functional Glycomics. This resource includes algorithms and tools to discover structural motifs, a heatmap visualization to compare multiple experiments, hierarchical clustering of Glycan Binding Proteins with respect to their binding motifs and a structural search feature on the experimental data.

UR - https://www.scopus.com/pages/publications/84930689109

U2 - 10.1093/bioinformatics/btu559

DO - 10.1093/bioinformatics/btu559

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SP - 3417

EP - 3418

JO - Bioinformatics

JF - Bioinformatics

IS - 23

ER -

GlycoPattern: A Web platform for glycan array mining

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