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Multi-scale Super-Resolution Magnetic Resonance Spectroscopic Imaging with Adjustable Sharpness

  • Siyuan Dong
  • , Gilbert Hangel
  • , Wolfgang Bogner
  • , Georg Widhalm
  • , Karl Rössler
  • , Siegfried Trattnig
  • , Chenyu You
  • , Robin de Graaf
  • , John A. Onofrey
  • , James S. Duncan
  • Yale University
  • Medical University of Vienna

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

10 Scopus citations

Abstract

Magnetic Resonance Spectroscopic Imaging (MRSI) is a valuable tool for studying metabolic activities in the human body, but the current applications are limited to low spatial resolutions. The existing deep learning-based MRSI super-resolution methods require training a separate network for each upscaling factor, which is time-consuming and memory inefficient. We tackle this multi-scale super-resolution problem using a Filter Scaling strategy that modulates the convolution filters based on the upscaling factor, such that a single network can be used for various upscaling factors. Observing that each metabolite has distinct spatial characteristics, we also modulate the network based on the specific metabolite. Furthermore, our network is conditioned on the weight of adversarial loss so that the perceptual sharpness of the super-resolved metabolic maps can be adjusted within a single network. We incorporate these network conditionings using a novel Multi-Conditional Module. The experiments were carried out on a1H-MRSI dataset from 15 high-grade glioma patients. Results indicate that the proposed network achieves the best performance among several multi-scale super-resolution methods and can provide super-resolved metabolic maps with adjustable sharpness. Our code is available at https://github.com/dsy199610/Multiscale-SR-MRSI-adjustable-sharpness.

Original languageEnglish
Title of host publicationMedical Image Computing and Computer Assisted Intervention – MICCAI 2022 - 25th International Conference, Proceedings
EditorsLinwei Wang, Qi Dou, P. Thomas Fletcher, Stefanie Speidel, Shuo Li
PublisherSpringer Science and Business Media Deutschland GmbH
Pages410-420
Number of pages11
ISBN (Print)9783031164453
DOIs
StatePublished - 2022
Event25th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2022 - Singapore, Singapore
Duration: Sep 18 2022Sep 22 2022

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume13436 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference25th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2022
Country/TerritorySingapore
CitySingapore
Period09/18/2209/22/22

Keywords

  • Brain MRSI
  • Network conditioning
  • Super-resolution

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