TY - GEN
T1 - PathLDM
T2 - 2024 IEEE Winter Conference on Applications of Computer Vision, WACV 2024
AU - Yellapragada, Srikar
AU - Graikos, Alexandros
AU - Prasanna, Prateek
AU - Kurc, Tahsin
AU - Saltz, Joel
AU - Samaras, Dimitris
N1 - Publisher Copyright:
© 2024 IEEE.
PY - 2024/1/3
Y1 - 2024/1/3
N2 - To achieve high-quality results, diffusion models must be trained on large datasets. This can be notably prohibitive for models in specialized domains, such as computational pathology. Conditioning on labeled data is known to help in data-efficient model training. Therefore, histopathology reports, which are rich in valuable clinical information, are an ideal choice as guidance for a histopathology generative model. In this paper, we introduce PathLDM, the first text-conditioned Latent Diffusion Model tailored for generating high-quality histopathology images. Leveraging the rich contextual information provided by pathology text reports, our approach fuses image and textual data to enhance the generation process. By utilizing GPT's capabilities to distill and summarize complex text reports, we establish an effective conditioning mechanism. Through strategic conditioning and necessary architectural enhancements, we achieved a SoTA FID score of 7.64 for text-to-image generation on the TCGA-BRCA dataset, significantly outperforming the closest text-conditioned competitor with FID 30.1. https://github.com/cvlab-stonybrook/PathLDM.
AB - To achieve high-quality results, diffusion models must be trained on large datasets. This can be notably prohibitive for models in specialized domains, such as computational pathology. Conditioning on labeled data is known to help in data-efficient model training. Therefore, histopathology reports, which are rich in valuable clinical information, are an ideal choice as guidance for a histopathology generative model. In this paper, we introduce PathLDM, the first text-conditioned Latent Diffusion Model tailored for generating high-quality histopathology images. Leveraging the rich contextual information provided by pathology text reports, our approach fuses image and textual data to enhance the generation process. By utilizing GPT's capabilities to distill and summarize complex text reports, we establish an effective conditioning mechanism. Through strategic conditioning and necessary architectural enhancements, we achieved a SoTA FID score of 7.64 for text-to-image generation on the TCGA-BRCA dataset, significantly outperforming the closest text-conditioned competitor with FID 30.1. https://github.com/cvlab-stonybrook/PathLDM.
KW - 3D
KW - Algorithms
KW - Algorithms
KW - Applications
KW - Biomedical / healthcare / medicine
KW - Generative models for image
KW - Vision + language and/or other modalities
KW - etc.
KW - video
UR - https://www.scopus.com/pages/publications/85188925492
U2 - 10.1109/WACV57701.2024.00510
DO - 10.1109/WACV57701.2024.00510
M3 - Conference contribution
AN - SCOPUS:85188925492
T3 - Proceedings - 2024 IEEE Winter Conference on Applications of Computer Vision, WACV 2024
SP - 5170
EP - 5179
BT - Proceedings - 2024 IEEE Winter Conference on Applications of Computer Vision, WACV 2024
PB - Institute of Electrical and Electronics Engineers Inc.
Y2 - 4 January 2024 through 8 January 2024
ER -