TY - GEN
T1 - Patient centered identification, attribution, and ranking of adverse drug events
AU - Banerjee, Ritwik
AU - Ramakrishnan, I. V.
AU - Henry, Mark
AU - Perciavalle, Matthew
N1 - Publisher Copyright:
© 2015 IEEE.
PY - 2015/12/8
Y1 - 2015/12/8
N2 - Adverse drug events (ADEs) trigger a high number of hospital emergency room (ER) visits. Information about ADEs is often available in online drug databases in the form of narrative texts, and serves as the physician's primary reference point for ADE attribution and diagnosis. Manually reviewing these narratives, however, is an error prone and time consuming process, especially due to the prevalence of polypharmacy. So ER health care providers, especially given the heavy volume of traffic in ERs, often either skip this step or at best do it rather perfunctorily. This causes ADEs to be missed or misdiagnosed, often leading to extensive and unnecessary testing and treatment, including hospitalization. In this paper, we present a system that automates the detection of ADEs and provides a list of suspect drugs, ranked by their likelihood of causing the patient's complaints and symptoms. The input data, i.e., Medications and complaints, are obtained from triage notes that often contain descriptive language. Our application utilizes heterogeneous information sources (including drug databases) to refine and transform these descriptions as well as the online database narratives using a natural language processing (NLP) pipeline. We then employ ranking measures to establish correspondence between the complaints and the medications. Our preliminary evaluation based on actual ER cases demonstrates that this system achieves high precision and recall.
AB - Adverse drug events (ADEs) trigger a high number of hospital emergency room (ER) visits. Information about ADEs is often available in online drug databases in the form of narrative texts, and serves as the physician's primary reference point for ADE attribution and diagnosis. Manually reviewing these narratives, however, is an error prone and time consuming process, especially due to the prevalence of polypharmacy. So ER health care providers, especially given the heavy volume of traffic in ERs, often either skip this step or at best do it rather perfunctorily. This causes ADEs to be missed or misdiagnosed, often leading to extensive and unnecessary testing and treatment, including hospitalization. In this paper, we present a system that automates the detection of ADEs and provides a list of suspect drugs, ranked by their likelihood of causing the patient's complaints and symptoms. The input data, i.e., Medications and complaints, are obtained from triage notes that often contain descriptive language. Our application utilizes heterogeneous information sources (including drug databases) to refine and transform these descriptions as well as the online database narratives using a natural language processing (NLP) pipeline. We then employ ranking measures to establish correspondence between the complaints and the medications. Our preliminary evaluation based on actual ER cases demonstrates that this system achieves high precision and recall.
KW - Adverse drug event
KW - Clinical decision support
KW - Information extraction
KW - Natural language processing
UR - https://www.scopus.com/pages/publications/84966425222
U2 - 10.1109/ICHI.2015.8
DO - 10.1109/ICHI.2015.8
M3 - Conference contribution
AN - SCOPUS:84966425222
T3 - Proceedings - 2015 IEEE International Conference on Healthcare Informatics, ICHI 2015
SP - 18
EP - 27
BT - Proceedings - 2015 IEEE International Conference on Healthcare Informatics, ICHI 2015
A2 - Fu, Wai-Tat
A2 - Balakrishnan, Prabhakaran
A2 - Harabagiu, Sanda
A2 - Wang, Fei
A2 - Srivatsava, Jaideep
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 3rd IEEE International Conference on Healthcare Informatics, ICHI 2015
Y2 - 21 October 2015 through 23 October 2015
ER -