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Restoring artifact-free microscopy image sequences

  • Carnegie Mellon University

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

12 Scopus citations

Abstract

Phase contrast and differential interference contrast, which are used to capture microscopy images of living cells, contain a few artifacts such as halo and shadow-cast effect. Removing these artifacts from microscopy images facilitates automated microscopy image analysis, such as the cell segmentation that is a critical step in cell tracking systems. We propose a restoration algorithm based on the microscopy imaging model and consider temporal consistency when restoring time-lapse microscopy image sequences. The artifact-free microscopy images are restored by minimizing a regularized quadratic cost function that is adaptable to input image properties. Our method achieves high segmentation accuracy and low computational cost compared to the previous methods.

Original languageEnglish
Title of host publication2011 8th IEEE International Symposium on Biomedical Imaging
Subtitle of host publicationFrom Nano to Macro, ISBI'11
PublisherIEEE Computer Society
Pages909-913
Number of pages5
ISBN (Print)9781424441280
DOIs
StatePublished - 2011
Event8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2011 - Chicago, IL, United States
Duration: Mar 30 2011Apr 2 2011

Publication series

NameProceedings - International Symposium on Biomedical Imaging
ISSN (Print)1945-7928
ISSN (Electronic)1945-8452

Conference

Conference8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2011
Country/TerritoryUnited States
CityChicago, IL
Period03/30/1104/2/11

Keywords

  • Microscopy image analysis
  • differential interference contrast
  • image restoration
  • phase contrast

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