TY - GEN
T1 - Self-Supervised Bulk Motion Artifact Removal in Optical Coherence Tomography Angiography
AU - Ren, Jiaxiang
AU - Park, Kicheon
AU - Pan, Yingtian
AU - Ling, Haibin
N1 - Publisher Copyright:
© 2022 IEEE.
PY - 2022
Y1 - 2022
N2 - Optical coherence tomography angiography (OCTA) is an important imaging modality in many bioengineering tasks. The image quality of OCTA, however, is often degraded by Bulk Motion Artifacts (BMA), which are due to micromotion of subjects and typically appear as bright stripes surrounded by blurred areas. State-of-the-art methods usually treat BMA removal as a learning-based image inpainting problem, but require numerous training samples with nontrivial annotation. In addition, these methods discard the rich structural and appearance information carried in the BMA stripe region. To address these issues, in this paper we propose a self-supervised content-aware BMA removal model. First, the gradient-based structural information and appearance feature are extracted from the BMA area and injected into the model to capture more connectivity. Second, with easily collected defective masks, the model is trained in a self-supervised manner, in which only the clear areas are used for training while the BMA areas for inference. With the structural information and appearance feature from noisy image as references, our model can remove larger BMA and produce better visualizing result. In addition, only 2D images with defective masks are involved, hence improving the efficiency of our method. Experiments on OCTA of mouse cortex demonstrate that our model can remove most BMA with extremely large sizes and inconsistent intensities while previous methods fail.
AB - Optical coherence tomography angiography (OCTA) is an important imaging modality in many bioengineering tasks. The image quality of OCTA, however, is often degraded by Bulk Motion Artifacts (BMA), which are due to micromotion of subjects and typically appear as bright stripes surrounded by blurred areas. State-of-the-art methods usually treat BMA removal as a learning-based image inpainting problem, but require numerous training samples with nontrivial annotation. In addition, these methods discard the rich structural and appearance information carried in the BMA stripe region. To address these issues, in this paper we propose a self-supervised content-aware BMA removal model. First, the gradient-based structural information and appearance feature are extracted from the BMA area and injected into the model to capture more connectivity. Second, with easily collected defective masks, the model is trained in a self-supervised manner, in which only the clear areas are used for training while the BMA areas for inference. With the structural information and appearance feature from noisy image as references, our model can remove larger BMA and produce better visualizing result. In addition, only 2D images with defective masks are involved, hence improving the efficiency of our method. Experiments on OCTA of mouse cortex demonstrate that our model can remove most BMA with extremely large sizes and inconsistent intensities while previous methods fail.
KW - Medical
KW - biological and cell microscopy
UR - https://www.scopus.com/pages/publications/85143069198
U2 - 10.1109/CVPR52688.2022.01996
DO - 10.1109/CVPR52688.2022.01996
M3 - Conference contribution
AN - SCOPUS:85143069198
T3 - Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition
SP - 20585
EP - 20593
BT - Proceedings - 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition, CVPR 2022
PB - IEEE Computer Society
T2 - 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition, CVPR 2022
Y2 - 19 June 2022 through 24 June 2022
ER -