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Shape-based tumor microenvironment analysis to differentiate non-small cell lung cancer subtypes: A radio-pathomic study

  • Stony Brook University

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Shaped-based descriptors from Computed Tomography (CT) scans and whole slide digital pathology images were used to differentiate the two major histopathological subtypes of non-small-cell lung cancer (NSCLC). Our two hypotheses are 1) Encoding information on local heterogeneity will augment the model's classification capabilities 2) Shape-based biomarkers from radiology and pathology can complement each other. Shape features were extracted from the tumor map from pathology and radiology images. In pathology, tumor-microenvironment features were encoded by clustering the tumor map into phenotype maps. These features performed better than the features from whole tumor map. Integration of radio-pathomics performed best, achieving 0.802 AUC.

Original languageEnglish
Title of host publicationMedical Imaging 2022
Subtitle of host publicationDigital and Computational Pathology
EditorsJohn E. Tomaszewski, Aaron D. Ward, Richard M. Levenson
PublisherSPIE
ISBN (Electronic)9781510649538
DOIs
StatePublished - 2022
EventMedical Imaging 2022: Digital and Computational Pathology - Virtual, Online
Duration: Mar 21 2022Mar 27 2022

Publication series

NameProgress in Biomedical Optics and Imaging - Proceedings of SPIE
Volume12039
ISSN (Print)1605-7422

Conference

ConferenceMedical Imaging 2022: Digital and Computational Pathology
CityVirtual, Online
Period03/21/2203/27/22

Keywords

  • Cluster phenotype map
  • Radio-Pathomic Study
  • Radiomic features
  • Shape features

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