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Spatial Diffusion for Cell Layout Generation

  • Chen Li
  • , Xiaoling Hu
  • , Shahira Abousamra
  • , Meilong Xu
  • , Chao Chen
  • Stony Brook University
  • Harvard University

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

Generative models, such as GANs and diffusion models, have been used to augment training sets and boost performances in different tasks. We focus on generative models for cell detection instead, i.e., locating and classifying cells in given pathology images. One important information that has been largely overlooked is the spatial patterns of the cells. In this paper, we propose a spatial-pattern-guided generative model for cell layout generation. Specifically, a novel diffusion model guided by spatial features and generates realistic cell layouts has been proposed. We explore different density models as spatial features for the diffusion model. In downstream tasks, we show that the generated cell layouts can be used to guide the generation of high-quality pathology images. Augmenting with these images can significantly boost the performance of SOTA cell detection methods. The code is available at https://github.com/superlc1995/Diffusion-cell.

Original languageEnglish
Title of host publicationMedical Image Computing and Computer Assisted Intervention – MICCAI 2024 - 27th International Conference, Proceedings
EditorsMarius George Linguraru, Qi Dou, Aasa Feragen, Stamatia Giannarou, Ben Glocker, Karim Lekadir, Julia A. Schnabel
PublisherSpringer Science and Business Media Deutschland GmbH
Pages481-491
Number of pages11
ISBN (Print)9783031720826
DOIs
StatePublished - 2024
Event27th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2024 - Marrakesh, Morocco
Duration: Oct 6 2024Oct 10 2024

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume15004 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference27th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2024
Country/TerritoryMorocco
CityMarrakesh
Period10/6/2410/10/24

Keywords

  • Cell Layout
  • Diffusion Model
  • Pathology Images

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