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Splice-switching ASOs targeting the AURKA 5′ UTR collapse an SRSF1-AURKA-MYC oncogenic circuit in pancreatic cancer

  • Alexander J. Kral
  • , Lu Jia
  • , Geun Young Sim
  • , Ledong Wan
  • , Yuma Ishigami
  • , Adrian R. Krainer
  • Cold Spring Harbor Laboratory
  • Stony Brook University

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

Pancreatic ductal adenocarcinoma (PDAC) remains a highly lethal malignancy, driven by oncogenic KRAS mutations and dysregulated oncogenes, including SRSF1, MYC, and Aurora kinase A (AURKA). Although KRAS-targeted therapies are in development, resistance mechanisms underscore the need to identify alternative vulnerabilities. Here, we uncover an SRSF1-AURKA-MYC oncogenic circuit, wherein SRSF1 regulates AURKA 5′ UTR alternative splicing, enhancing AURKA protein expression; AURKA positively regulates SRSF1 and MYC post-translationally, independently of its kinase activity; and MYC transcriptionally upregulates both SRSF1 and AURKA. Elevated SRSF1 in tumor cells promotes inclusion of an Alu-derived exon in the AURKA 5′ UTR, resulting in splicing-dependent mRNA accumulation and exon-junction-complex deposition. Modulating 5′ UTR splicing with splice-switching antisense oligonucleotides (ASOs) collapses the oncogenic circuit, reducing PDAC cell viability and triggering apoptosis. Our findings identify AURKA alternative splicing as a critical regulatory node and highlight a potential therapeutic strategy that simultaneously targets SRSF1, AURKA, and MYC oncogenes.

Original languageEnglish
Pages (from-to)60-77.e7
JournalMolecular Cell
Volume86
Issue number1
DOIs
StatePublished - Jan 8 2026

Keywords

  • ASOs
  • AURKA
  • Alu exonization
  • Aurora kinase A
  • MYC signaling
  • PDAC
  • RNA splicing
  • SRSF1
  • antisense oligonucleotides
  • oncogenic circuit
  • pancreatic ductal adenocarcinoma
  • splicing-dependent gene expression
  • therapeutic splicing modulation

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