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Unsupervised Network Learning for Cell Segmentation

  • Stony Brook University

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

5 Scopus citations

Abstract

Cell segmentation is a fundamental and critical step in numerous biomedical image studies. For the fully-supervised cell segmentation algorithms, although highly effective, a large quantity of high-quality training data is required, which is usually labor-intensive to produce. In this work, we formulate the unsupervised cell segmentation as a slightly under-constrained problem, and present the Unsupervised Segmentation network learning by Adversarial Reconstruction (USAR), a novel model able to train cell segmentation networks without any annotation. The key idea is to leverage adversarial learning paradigm to train the segmentation network by adversarially reconstructing the input images based on their segmentation results generated by the segmentation network. The USAR model demonstrates its promising application on training segmentation networks in an unsupervised manner, on two benchmark datasets. The implementation of this project can be found at https://github.com/LiangHann/USAR.

Original languageEnglish
Title of host publicationMedical Image Computing and Computer Assisted Intervention – MICCAI 2021 - 24th International Conference, Proceedings
EditorsMarleen de Bruijne, Marleen de Bruijne, Philippe C. Cattin, Stéphane Cotin, Nicolas Padoy, Stefanie Speidel, Yefeng Zheng, Caroline Essert
PublisherSpringer Science and Business Media Deutschland GmbH
Pages282-292
Number of pages11
ISBN (Print)9783030871925
DOIs
StatePublished - 2021
Event24th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2021 - Virtual, Online
Duration: Sep 27 2021Oct 1 2021

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume12901 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference24th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2021
CityVirtual, Online
Period09/27/2110/1/21

Keywords

  • Adversarial image reconstruction
  • Cell segmentation
  • Unsupervised learning

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